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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs13429609 chr2:201816257 C/T 2.98E-7 67 24.77 27.9 1.27 KM Plot
UVM rs139273189 chr15:40650435 C/T 4.04E-7 67 26.6 24.87 1.27 KM Plot
UVM rs139412757 chr15:40867730 GAA/GA 0.000313 65 27.88 27.37 16.78 KM Plot
UVM rs141225607 chr2:239026854 GAGC/G 6.89E-5 65 27.37 24.6 1.18 KM Plot
UVM rs141395434 chr12:9766633 C/T 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs143761360 chr20:30369729 G/GT 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs144633695 chr20:30324188 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs1453183 chr15:40862930 A/G 0.000227 67 16.78 26.12 27.87 KM Plot
UVM rs145405076 chr20:30297418 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs145651191 chr20:30324612 GTGATCCACCCGCC/G 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs145880601 chr20:30233181 T/C 0.000119 67 27.93 2.27 7.6 KM Plot
UVM rs147802579 chr12:9820438 TAAG/T 0.000159 65 27.87 22.33 7.6 KM Plot
UVM rs1484998 chr20:30232289 A/G 6.36E-5 67 27.92 8.25 7.6 KM Plot
UVM rs150421751 chr12:9764912 C/T 0.00014 66 27.37 21.8 7.6 KM Plot
UVM rs150521962 chr20:30323209 C/T 0.000118 67 27.92 8.18 7.6 KM Plot